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. 2005 Dec;187(23):7901–7911. doi: 10.1128/JB.187.23.7901-7911.2005

TABLE 2.

Oligonucleotides used to generate deletions mutants

Oligonucleotidea Sequence (5′→3′)b Prophage or gene deleted
sb49-3D ATGACACCACGTCAACGCCGTCAACATCGTAACGCAATAGAAAAAGCCGCTGTGTAGGCTGGAGCTGCTTC sb49
sb49-4R TCAAGATATTTTTTCATTTTGCTTTCTCATTGCATCCCTGAATGCGAGAAAATTCCGGGGATCCGTCGACC sb49
sb50-1D ATGCTTGGCAAAGCTGCGCCGCGATGGCAGCGACGAAAAGCAAGTCAATTAGTGTAGGCTGGAGCTGCTTC sb50
sb50-2R ACATGCCAGCAGAAGCTGCGCAATTTCTCCGCTCGCTGAAACTGCCAGTCAATTCCGGGGATCCGTCGAC sb50
pp291 AGAATATCGCGCAGTACCAGTATGTTTCCGCCGTTCATCACAGATCATCGAGCTCTCCCG ST64B
pp293 ATACCTGAAAGCTGCTTCTGGTATGTGCTGCATGACCGCATGTAGGCTGGAGCTGCTTCG ST64B
pp339 ACTGTACTTCTGCTTGTCTTTTGCCGTTCCCTCATAGTCTCATATGAATATCCTCCTTAG SopEΦ
pp340 TTAACTCCCTTCCGGTTAGCCGATAACAGAATCCAGTACATGTAGGCTGGAGCTGCTTCG SopEΦ
a

sb primers were used with template plasmid pKD13 (14); pp291 and pp293 were used with template plasmid pNFB22 (Figueroa-Bossi and Bossi, unpublished results); pp339 and pp340 were used with plasmid pKD4 (14).

b

Sequences annealing to the template plasmid pKD13 are in italics.