Table II.
Summary of micro-array experiments with relevant Elip1 results
| Exp. No. | Description | Experimental Conditions
|
R/G Normalization | |
|---|---|---|---|---|
| Red channel (R) | Green channel (G) | |||
| Anatomical comparison | ||||
| 11333/11375 | Elip1 is transcriptionally regulated | Untreated | Cordycepin treated | 2.24 |
| 2370/2371 | Elip1 levels are higher in leaves than in flowers | Leaves | Flowers | 3.91 |
| 7197/7199 | Elip1 levels are higher in leaves relative to whole plant | Leaves | Whole-plant tissue | 1.26 |
| 7200/7201 | Elip1 levels are higher in flowers relative to whole plant | Whole-plant tissue | Flowers | 2.05 |
| Abiotic stress | ||||
| 4649/4650 | CO2 stress positively effects Elip1 | High CO2 | Control | 1.53 |
| 3749/3743 | Indole-3-acetic acid down-regulates Elip1 | Control | Indole-3-acetic acid treated | 3.37 |
| 7304/7305 | Aluminum stress positively effects Elip1 | Aluminum | Control | 1.67 |
| Light treatment | ||||
| 3610 | Elip1 levels are lower in etiolated seedlings than in adult tissue | Etiolated seedlings | Leaves | 0.857 |
| 6617 | Blue light induces Elip1 in etiolated seedlings | Etiolated plus blue light | Etiolated | 3.925 |
| 6619 | nph4-2 does not effect blue-light induction of Elip1 in etiolated seedlings | Wild-type etiolated seedlings exposed to blue light | nph4-2 etiolated seedlings exposed to blue light | 1.03 |
| 8266/7230 | Far-red-enriched light induces Elip1 in adult plants | Far-red-enriched light | White light | 3.07 |
Data were adapted from the Stanford Microarray Database (http://genome-www4.stanford.edu/Micro/Array/SMD). Only experiments giving reciprocal R/G results (when available as designated by two ID nos.) were chosen. R/G = 1, Elip1 levels in the two mRNA population are equal (i.e. no induction). R/G < 1, Elip1 is higher in the mRNA population that is marked by the green probes (G). R/G > 1, Elip1 is higher in the mRNA population that is marked by the red probes (R). Exp. No., Experiment identification no. according to Arabidopsis Functional Genomics Consortium.