Table IV.
Primer Name | Sequence (5′ → 3′) | Size (Col-0) | Size (Ler) |
---|---|---|---|
bp | |||
recMS1f | GTGTGTCTATTAATATATCAAGAC | 125 | ∼120 |
recMS1r | GTTGTTTTATCTATGTTTATCAAG | ||
recMS2f | CCATTGGAGATGGTCTTACAC | 107 | ∼90 |
recMS2r | CTTTGTCACCAAGTCTTGTATAG | ||
recMS5f | GAATCAGATAATTAAGTTAGATAG | 106 | No product |
recMS5r | GGTTCTTCATAAAAACAAAGCAC | ||
rec6f | GTGTAGTTTCATTTGTGCTATC | 75 | 147 |
rec6r | CTTTAAAACTCTAAGCCTAGAC | ||
recMS7f | CATAAGATGGAAGCGTTAGAC | 132 | ∼150 |
recMS7r | GATGGTAAACTACTTTGTGAAC | ||
recMS9f | GGTTCCAAGTTACAAACTTTAAC | 105 | ∼90 |
recMS9r | CGACCTAACGGCAAGTGAAAG | ||
EN-MSfor | CATGAGAGCGGCATTCACCAG | 100 | 88 |
EN-MSrev | GGACAATTATACACATACAACGC | ||
16Cm2 | GGGCTTATGTGCTTGAAC | 430 | 430 |
Southex | GAAATGTCGAGGGGCATATG | SNPs, 1-bp indels | SNPs, 1-bp indels |
EDIT1-2a | GTACCACAGTAATATCAATTTCC | 207 | 208 |
11t1 | GTTCATGAGATATGAGTAAGTGG | SNPs, 1-bp indel | SNPs, 1-bp indel |
C/L-ESfEE | ATATGAATTCAACTATGTGCGTGTATTCGAC | – | – |
CESrEE | ATATCTCGAGCACATTCGATGAAACCTGAGG | – | – |
L-ENfEE | ATATGGATCCTATGTGCGTGTATTAGACAC | – | – |
L-ENrEE | ATATCTCGAGTACAACAGCGGAAATCTGAGG | – | – |
IPMS0 | CACCGTCACGTTGAAACCTTC | – | – |
E116r | TTTTTAATTCAGGCAGCGACTCT | – | – |
1MAM1a | ACTCCATAGTGATGGCTTCATCGCTTCTG | – | – |
2MAM1b | AGAGATACAACGTGTTTACACATTC | – | – |
1MAMLa | TATAGTAATGGCTTCGTTACTTCTC | – | – |
2MAMLb | TCTTCCCAAACTTATACAACAGCG | – | – |
Size is indicated for PCR products used as genetic markers.