Skip to main content
. Author manuscript; available in PMC: 2026 Sep 1.
Published in final edited form as: Clin Perinatol. 2025 Jul 15;52(3):589–608. doi: 10.1016/j.clp.2025.06.010

Table 1.

Chromosomal Aneuploidies and Copy Number Variants Associated With CHD

Chromosome Change Gene Cardiac Defect Percent with CHD Clinical features References
Chromosomal Aneuploidies
Trisomy 21 (Down syndrome) Unknown AVSD, ASD, VSD, PDA, TOF 40–50% Short stature, cognitive deficits, atlantoaxial instability, immune system dysfunction, hypotonia, hypothyroidism, premature aging 21788214
20624800
Trisomy 18 (Edwards syndrome) Unknown ASD, VSD, PDA, TOF, DORV, TGA, CoA, BAV 80–90% IUGR, polyhydramnios, micrognathia, short sternum, hypertonia, rocker-bottom feet, overlapping fingers and toes, tracheoesophageal fistula, congenital diaphragmatic hernia, omphalocele, renal anomalies, biliary atresia, severe intellectual disability 26347425
Trisomy 13 (Patau syndrome) Unknown ASD, VSD, PDA, HLHS, atrial isomerism 57–80% Cleft lip and palate, scalp defects, hypotelorism, microphthalmia or anophthalmia, colobomata of irides, holoprosencephaly, microcephaly, deafness, severe intellectual disability, rib abnormalities, polydactyly, omphalocele, renal abnormalities, hypospadias, cryptorchidism, uterine abnormalities 26347425
21990216
Monosomy X (Turner syndrome) Unknown CoA, BAV, AS, HLHS, Dilated Ao 23–35% Short stature (partially growth hormone responsive), cognitive deficits, ADHD, lymphedema, widely spaced hypoplastic nipples, webbed neck, primary amenorrhea 28705803
25517026
Copy Number Variants
22q11.2 deletion syndrome (DiGeorge syndrome) TBX1 Conotruncal defects, IAA-B, TOF, conoventricular VSD 75% Cleft palate, bifid uvula, velopharyngeal insufficiency, microcephaly, hypocalcemia/hypoparathyroidism, thymic hypoplasia/immune deficit, psychiatric disorder, learning disability 23604262
26742502
1p36 deletion syndrome Unknown PDA, VSD, ASD, BAV, Ebstein’s anomaly, LVNC 70% Growth deficiency, intellectual disability, microcephaly, deep-set eyes, low-set ears, hearing loss, hypotonia, seizures, central nervous system defects, genital anomalies 18245432
Deletion 7q11.23 (Williams-Beuren syndrome) ELN SVAS, PS, PPS 80% Unusual facies, thick lips, strabismus, stellate iris pattern, intellectual disability 20089974
12161592
Deletion 11q (Jacobsen syndrome) ETS1
FLI1
HLHS, AS, VSD, CoA, Shone’s complex 56% Growth retardation, developmental delay, thrombocytopenia, platelet dysfunction, widely spaced eyes, strabismus, broad nasal bridge, thin upper lip, prominent forehead, intellectual disability 15266616
26285164

ADHD, attention deficit/hyperactivity disorder; AS, aortic stenosis; ASD, atrial septal defect; AVSD, atrioventricular septal defect; BAV, bicuspid aortic valve; CHD, congenital heart disease; CNVs, copy number variants; CoA, coarctation of the aorta; Dilated Ao, dilated ascending aorta; DORV, double-outlet right ventricle; HLHS, hypoplastic left heart syndrome; IAA-B, interruption of aortic arch type B; IUGR, intrauterine growth retardation; LVNC, left ventricular noncompaction cardiomyopathy; PDA, patent ductus arteriosus; PPS, peripheral pulmonary stenosis; PS, pulmonary stenosis; SVAS, supravalvular aortic stenosis; TGA, transposition of great arteries; TOF, tetralogy of Fallot and VSD, ventricular septal defect.