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. 2026 Feb 23;16(12):10582–10596. doi: 10.1039/d5ra08239k

Table 4. The binding energy (ΔGbind) in kcal mol−1, inhibition constant (Ki), and amino acid residue–ligand interactions for the selected compounds and standard drug ketoconazole targeting 14α-sterol demethylase (CYP51) (PDB ID: 1EA1).

Ligand compound ΔGbind K i a (µM) Amino acid residual (interactions)
3 −8.20 0.98 Pro320(Hydrogen bond), Ile322(π–alkyl), Leu321(π–alkyl), Tyr76(π–π T-shaped), Phe78(π–π T-shaped), Met79 (π–sulphur, π–alkyl), Met433(π–lone pair), Phe255(van der Waals), Val435(van der Waals), Val434(van der Waals), His259(van der Waals), Ile323(van der Waals)
5 −8.38 0.72 Met433(π–lone pair), Ile322(π–alkyl), Val435(π-alkyl), Leu321(π-alkyl), Val434(π-alkyl), Met79(π-alkyl), Phe78(π– π T-shaped), Ile323(π-donor hydrogen bond)), Phe255(van der Waals), His259(van der Waals), Pro320(van der Waals), Tyr76 (van der Waals)
6 −7.22 5.13 Ser252(Hydrogen bond), Leu100(π-alkyl), Met99 (π-alkyl), Ala256(π-alkyl), Leu321 (π-alkyl), Hem460(π-alkyl), Phe83(π– π T-shaped), Arg96(van der Waals), Phe255(van der Waals), Met253(van der Waals)
Ketoconazole −9.45 0.12 Arg96(Hydrogen bond), Thr80(Carbon hydrogen bond), Gly84(Carbon hydrogen bond), Phe83(π–π T-shaped), Phe78(π–π T-shaped), Met79(π–alkyl), Leu321(alkyl, π–alkyl), Val434(alkyl), His259(alkyl), Tyr76(π–sigma), Met433(van der Waals), Phe255(van der Waals), Hem460(van der Waals), Ala256(van der Waals),Met99(van der Waals)
a

K i = exp(ΔG/RT), where R = 1.985 × 10−3 kcal mol−1 K−1 and T = 298.15 K.