Table 2:
Post-hoc analysis for Figure 5B: Tukey’s multiple comparisons.
| Groups Compared | Timepoint | Estimate | SE | Degree of Freedom | T ratio | P value | Annotation |
|---|---|---|---|---|---|---|---|
| AB_control - FMT1 | 1wkpostFMT | 0.164 | 0.0371 | 159 | 4.42 | 5.41E-05 | #### |
| AB_control - FMT3 | 1wkpostFMT | 0.143 | 0.0371 | 159 | 3.85 | 4.90E-04 | *** |
| FMT1 - FMT3 | 1wkpostFMT | −0.0210 | 0.0371 | 159 | −0.564 | 8.39E-01 | |
| AB_control - FMT1 | 2wkspostFMT | 0.0341 | 0.0371 | 159 | 0.918 | 6.30E-01 | |
| AB_control - FMT3 | 2wkspostFMT | 0.0534 | 0.0371 | 159 | 1.44 | 3.23E-01 | |
| FMT1 - FMT3 | 2wkspostFMT | 0.0194 | 0.0371 | 159 | 0.521 | 8.61E-01 | |
| AB_control - FMT1 | 3wkspostFMT | 0.0616 | 0.0371 | 159 | 1.66 | 2.24E-01 | |
| AB_control - FMT3 | 3wkspostFMT | 0.0420 | 0.0371 | 159 | 1.13 | 4.97E-01 | |
| FMT1 - FMT3 | 3wkspostFMT | −0.0196 | 0.0371 | 159 | −0.529 | 8.57E-01 | |
| AB_control - FMT1 | 4wkspostFMT | 0.123 | 0.0371 | 159 | 3.32 | 3.14E-03 | ## |
| AB_control - FMT3 | 4wkspostFMT | 0.0942 | 0.0371 | 159 | 2.54 | 3.23E-02 | * |
| FMT1 - FMT3 | 4wkspostFMT | −0.0292 | 0.0371 | 159 | −0.786 | 7.12E-01 | |
| AB_control - FMT1 | 5wkspostFMT | 0.08371 | 0.0371 | 159 | 2.254 | 6.54E-02 | |
| AB_control - FMT3 | 5wkspostFMT | 0.100 | 0.0415 | 159 | 2.41 | 4.44E-02 | * |
| FMT1 - FMT3 | 5wkspostFMT | 0.0164 | 0.0415 | 159 | 0.397 | 9.17E-01 | |
| AB_control - FMT1 | 6wkspostFMT | 0.0587 | 0.0371 | 159 | 1.58 | 2.57E-01 | |
| AB_control - FMT3 | 6wkspostFMT | 0.0887 | 0.0371 | 159 | 2.39 | 4.73E-02 | * |
| FMT1 - FMT3 | 6wkspostFMT | 0.0300 | 0.0371 | 159 | 0.807 | 6.99E-01 | |
| AB_control - FMT3 | 7wkspostFMT | 0.144 | 0.0371 | 159 | 3.88 | 1.53E-04 | *** |
| AB_control - FMT3 | 8wkspostFMT | 0.137 | 0.0371 | 159 | 3.70 | 2.97E-04 | *** |
| AB_control - FMT1 | last day of FMT | 0.0814 | 0.0371 | 159 | 2.19 | 7.55E-02 | |
| AB_control - FMT3 | last day of FMT | 0.0892 | 0.0371 | 159 | 2.40 | 4.55E-02 | * |
| FMT1 - FMT3 | last day of FMT | 0.00782 | 0.0371 | 159 | 0.210 | 9.76E-01 | |
| AB_control - FMT1 | post-abx | 0.0589 | 0.0455 | 159 | 1.29 | 4.00E-01 | |
| AB_control - FMT3 | post-abx | 0.0116 | 0.0389 | 159 | 0.298 | 9.52E-01 | |
| FMT1 - FMT3 | post-abx | −0.0473 | 0.0470 | 159 | −1.01 | 5.74E-01 | |
| AB_control - FMT1 | pre-abx | 0.0474 | 0.0389 | 159 | 1.22 | 4.45E-01 | |
| AB_control - FMT3 | pre-abx | 0.0178 | 0.0389 | 159 | 0.4583 | 8.91E-01 | |
| FMT1 - FMT3 | pre-abx | −0.0295 | 0.0407 | 159 | −0.726 | 7.49E-01 | |
| AB_control - FMT1 | pre-FMT | 0.0392 | 0.0407 | 159 | 0.964 | 6.01E-01 | |
| AB_control - FMT3 | pre-FMT | 0.0103 | 0.0407 | 159 | 0.254 | 9.65E-01 | |
| FMT1 - FMT3 | pre-FMT | −0.0289 | 0.0407 | 159 | −0.710 | 7.58E-01 |