TABLE 2.
Structural and functional annotation of the eight OSCC-associated variants selected for downstream modeling and docking. For each gene, the corresponding SNP (rsID), amino-acid substitution, and PDB ID are shown. References indicate the primary literature that determined the structure of these proteins experimentally.
| Protein | PDB ID | Variant (rsID) | Amino acid substitution | References |
|---|---|---|---|---|
| ATM | 7SIC | rs1801516 | D1853N | Warren and Pavletich (2022) |
| XRCC1 | 2D8M | rs1799782 and rs25487 | R194W and Q399R | Nagashima et al. (2006) |
| FLT3 | 3QS7 | rs1933437 | T227M | Verstraete et al. (2011) |
| MUTYH | 8FAY | rs3219489 | Q310H | Trasvina-Arenas et al. (2024) |
| XPC | 8EBU | rs2228000 and rs2228001 | A499V and Q939K | Kim et al. (2023) |
| MSH3 | 8OLX | rs1650697 | I79V | Lee et al. (2024) |