| BMI |
Body mass index |
| CI |
Confidence interval |
| COL11A2 |
Collagen type XI alpha 2 chain |
| COL27A1 |
Collagen type XXVII alpha 1 chain |
| COMT |
Catechol-O-methyltransferase |
| dbGaP |
Database of Genotypes and Phenotypes |
| DNA |
Deoxyribonucleic acid |
| DUX4 |
Double homeobox 4 |
| DUXA |
Double homeobox A |
| eQTL |
Expression Quantitative Trait Locus |
| GDF5 |
Growth differentiation factor 5 |
| GeCKO |
Genetic Components of Knee Osteoarthritis |
| GTEx |
Genotype-Tissue Expression |
| GWAS |
Genome-wide association study |
| HWE |
Hardy–Weinberg equilibrium |
| IL-1 |
Interleukin-1 |
| IL-6 |
Interleukin-6 |
| IL-8 |
Interleukin-8 |
| IL-36 |
Interleukin-36 |
| IL-36γ |
Interleukin-36 gamma |
| IL-36R |
Interleukin-36 receptor |
| IL36B |
Interleukin 36 beta |
| IQR |
Interquartile range |
| LD |
Linkage disequilibrium |
| LMCD1-AS1 |
LMCD1 antisense RNA 1 |
| lncRNA |
Long non-coding RNA |
| LOC105378178 |
Uncharacterised non-coding RNA locus |
| LOC124907827 |
Uncharacterised non-coding RNA locus |
| MAF |
Minor allele frequency |
| Minimac4 |
Minimac4 imputation software |
| mtDNA |
Mitochondrial DNA |
| OA |
Osteoarthritis |
| OAI |
Osteoarthritis Initiative |
| OR |
Odds ratio |
| PBL |
Peripheral blood leukocytes |
| PCA |
Principal component analysis |
| PC |
Principal component |
| PCR |
Polymerase chain reaction |
| QC |
Quality control |
| QQ |
Quantile–quantile |
| RAI1 |
Retinoic acid induced 1 |
| ROS |
Reactive oxygen species |
| r2
|
Squared correlation coefficient |
| RNA |
Ribonucleic acid |
| Rsq |
Imputation quality metric |
| SBE |
Single base extension |
| SCN9A |
Sodium voltage-gated channel alpha subunit 9 |
| SD |
Standard deviation |
| SNP |
Single nucleotide polymorphism |
| SPSS |
Statistical Package for the Social Sciences |
| sQTL |
Splicing quantitative trait locus |
| TACR1 |
Tachykinin receptor 1 |
| TRPV1 |
Transient receptor potential vanilloid 1 |
| VCF |
Variant call format |
| WOMAC |
Western Ontario and McMaster Universities Osteoarthritis Index |