| AUC | Area under the receiver operating characteristic curve |
| BLAST | Basic Local Alignment Search Tool |
| CV | Cross-validation |
| CVH | Chinese Virtual Herbarium |
| EN | Endangered |
| FDR | False Discovery Rate |
| GA | Gibberellin |
| GEA | Genotype–environment association |
| GF | Gradient Forest |
| GO | Gene Ontology |
| HWSD | Harmonized World Soil Database |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| LD | Linkage disequilibrium |
| LFMM | Latent Factor Mixed Model |
| LGM | Last Glacial Maximum |
| MAF | Minor allele frequency |
| MaxEnt | Maximum entropy modeling |
| MH | Mid-Holocene |
| NCBI | National Center for Biotechnology Information |
| NGDC | National Genomics Data Center |
| NJ | Neighbor-joining |
| Ne | Effective population size |
| PCA | Principal component analysis |
| RDA | Redundancy analysis |
| RONA | Risk of non-adaptedness |
| SDM | Species distribution model |
| SNP | Single-nucleotide polymorphism |
| SSP | Shared Socioeconomic Pathway |
| VCF | Variant Call Format |