Table 1.
PCR conditionsa
| Name | Step 1 | Step 2 | Step 3 | Run time (min) | |||
|---|---|---|---|---|---|---|---|
| °C | s | °C | s | °C | s | ||
| Conventionalb | 95 | 15 | 60 | 15 | 72 | 60 | 60 |
| Universal | 95 | 15 | 60 | 60 | n/ac | n/a | 50 |
| Afast | 95 | 1 | 64 | 35 | n/a | n/a | 24 |
| Mfast | 95 | 5 | 60 | 15 | 72 | 15 | 23 |
| Sfast | 95 | 10 | 60/62 | 30 | n/a | n/a | 26 |
aAll protocols are preceded by an initial 5 min at 95°C step to activate the polymerase and repeated for 40 cycles.
bConventional conditions are shown for comparison assuming an extension time of 60 s per 1000 bp amplicon length and optimal Taq polymerase activity at 72°C (7).
cNon applicable.