TABLE 1.
Strain, plasmid, or primer | Relevant featuresb | Source of reference |
---|---|---|
Strains | ||
L. plantaruma | ||
MD007 | L. plantarum NCIMB8826 Δalr,d-Ala auxotroph | M. Deghorain, unpublished data |
MD007Int6 | Emr, nisRK, pMEC10 chromosomal integration in MD007 at tRNASer | This work |
MD007::pGIP014 | Emr, nisRK, pGIP014 chromosomal integration in MD007 at tRNASer | This work |
L. lactis | ||
NZ3900 | MG1363 with a chromosomal insertion of nisRK | 12 |
PH3960 | NZ3900 Δalr, nisRK | 29 |
Plasmids | ||
pJDC9 | Emr | 10 |
pGIP009 | Emr, pJDC9 derivative containing L. lactis alr gene | This work |
pGIT032 | Emr Cmr, PldhL | 18 |
pNZ2650 | Cmr, PnisA | 29 |
pGIP011 | Emr Cmr, pGIT032 derivative containing L. lactis alr downstream of PldhL | This work |
pGIP012 | Cmr, pNZ2650 derivative containing L. lactis alr downstream of PnisA | This work |
pNG8048-Cre | Cmr | 7 |
pUC-NcoI | Apr, pUC18 derivative containing NcoI and ribosome-binding site of prtP | 20 |
pNZ7110 | Apr, pUC derivative containing cre and TpepN | This work |
pNZ7115 | Apr, pNZ7110 with cre replaced by L. plantarum alr PCR product | This work |
PNZ8020 | Cmr, PnisA | 11 |
pGIP013 | pNZ8020 derivative containing L. plantarum alr from pNZ7115 | This work |
pGEMT-easy | Apr | Promega |
pGIP010 | Apr, pGEMT-easy derivative containing L. lactis alr PCR product | This work |
pMEC10 | Emr, nisRK | 38 |
pGIP014 | Emr, nisRK, pMEC10 derivative containing alr fragment of pGIP010 | This work |
Primers | ||
LLALR-5 | 5′-CGAGGATCCGCATAGTAATTTAGAAGCTGTTGC-3′ | This work |
LLALR-11 | 5′-ACGCGTCGACATTTGTAAAGGCTTTTATGAGAT-3′ | This work |
LLALR-12 | 5′-GGGGTACCATTTGTAAAGGCTTTTATGAGAT-3′ | This work |
LLALR-13 | 5′-CGGAATTCATTACAGCTCCAAGACTAGTC-3′ | This work |
TRNA | 5′-GCGAACCGGCTAATACCGGC-3′ | This work |
409301L1 | 5′-AACAGAAGGTGGGACAGTAG-3′ | This work |
LplAlr_F | 5′-AGGCAATTTGCCATGGTTGTAATTGG-3′ | This work |
LplAlr_R | 5′-ACGTTCTAGATTAATCTATATAAACTCTCGG-3′ | This work |
Strain NCIMB8826 was obtained from the National Collections of Industrial, Food and Marine Bacteria, Aberdeen, Scotland.
Apr, ampicillin resistant; Cmr, chloramphenicol resistant; Emr, erythromycin resistant. Underscored base pairs in primers indicate introduced restriction sites.