| •OH | Hydroxyl radicals |
| 1O2 | Singlet oxygen |
| 3Chl | Triplet state of chlorophyll |
| β-CC | β-cyclocitral |
| ABA | Abscisic acid |
| APX | Ascorbate peroxidase |
| AsA-GSH | Ascorbate–glutathione |
| CAM | Crassulacean Acid Metabolism |
| CEF | Cyclic electron flow |
| EX1 | Nuclear-encoded chloroplast proteins EXECUTER1 |
| EX2 | Nuclear-encoded chloroplast proteins EXECUTER2 |
| GWAS | Genome-wide association studies |
| GST | Glutathione S-transferase |
| H2O2 | Hydrogen peroxide |
| HSPs | Heat shock proteins |
| JA | Jasmonic acid |
| MDA | Malondialdehyde |
| MEcPP | Methylerythritol cyclodiphosphate |
| MSRs | Methionine sulfoxide reductases |
| NPQ | Non-photochemical quenching |
| NTRC | NADPH-thioredoxin reductase C |
| O2•− | Superoxide anions |
| PAP | 3′-phosphoadenosine 5′-phosphate |
| PETC | Photosynthetic electron transport chain |
| PRXs | Peroxiredoxins |
| PSI | Photosystem I |
| PSII | Photosystem II |
| PSBS | PSII Subunit S |
| PUFAs | Polyunsaturated fatty acids |
| RBOH | Respiratory burst oxidase homolog |
| RES | Reactive electrophilic species |
| ROS | Reactive oxygen species |
| SA | Salicylic acid |
| SAA | Systemic acquired acclimation |
| SAR | Systemic acquired resistance |
| Trx | Thioredoxin |
| UPS | Ubiquitin–proteasome system |
| WWC | Water–water cycle |
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