AS	Alternative splicing
APA	Alternative polyadenylation
CDSs	Coding sequences
UTRs	Untranslated regions
PAS	Polyadenylation site
RNA-seq	RNA sequencing
Iso-seq	Isoform sequencing
CCS	Circular consensus sequence
FLNC	Full-length non-chimeric
FPKMs	Fragments per million transcripts
DEGs	Differentially expressed genes
KEGG	Kyoto Encyclopedia of Genes and Genomes
ES	Exon skipping
IR	Intron retention
A3SSs	Alternative 3′ splicing sites
A5SSs	Alternative 5′ splicing sites
MEEs	Mutually exclusive exons
MT	Major transcript
PPI	Protein–Protein Interaction
TFs	Transcription factors
EPC	Edge Percolated Component
qPCR	Real-time quantitative PCR
EMSA	Electrophoretic mobility shift assay
IGHM	Immunoglobulin heavy constant mu
HDAC10	Histone deacetylase 10
CSF1R	Colony-stimulating factor 1 receptor
ATF6	Activating transcription factor 6 beta
FSM	Full splice match
ISM	Incomplete splice match
NIC	Novel-in-catalog
NNC	Novel-not-in-catalog
hnRNP	Heterogeneous nuclear ribonucleoprotein
LY9	lymphocyte antigen 9
TRAF	TNF receptor-associated factor
MBD1	Methyl-CpG binding domain protein 1
TRAF3IP3	TRAF3-interacting protein 3
EEF2	Eukaryotic translation elongation factor 2
RGS19	Regulator of G protein signaling 19
TLR4	Toll-like receptor 4
IRF3	Interferon regulatory factor 3
AMT	Alternative MT
REPS1	RalBP1 associated EPS domain containing 1
SERBP1	SERPINE1 mRNA binding protein 1
mPAS	Major PAS