Inv	Invertase
SPS	Sucrose Phosphate Synthase
SUS	Sucrose Synthase
FRK	Fructokinase
HXK	Hexokinase
F6P	Fructose-6-phosphate
G6P	Glucose-6-phosphate
UDP-glucose	Uridine Diphosphate Glucose
SPP	Sucrose-Phosphate Phosphatase
BSA	Bulked Segregation Analysis
RNA-seq	RNA sequencing
BSA-seq	Bulked Segregation Analysis Sequencing
RIL	Recombinant Inbred Line
DAP	Days after Pollination
HPLC-ELSD	High-Performance Liquid Chromatography–Evaporative Light Scattering Detection
BWA	Burrows–Wheeler Aligner
GATK	GATK
Indels	Insertions/Deletions
SNPs	Single-Nucleotide Polymorphisms
ED	Euclidean Distance
SnpEff	SNP Effect Predictor
FPKM	Fragments Per Kilobase Million Reads
qRT-PCR	Quantitative Real-Time PCR
Blastp	Basic Local Alignment Search Tool for proteins
NCBI	National Center for Biotechnology Information
ANOVA	Analysis of Variance
SPSS	Statistical Product and Service Solutions
SOAPnuke	SOAPnuke sequencing data filtering software
FGGY	FGGY carbohydrate kinase domain
ADP–glucose	Adenosine Diphosphate Glucose
AGPase	ADP–glucose pyrophosphorylase
SS4	Starch Synthase 4
SS5	Starch Synthase 5