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. 2003 Mar;84(3):2090–2098. doi: 10.1016/S0006-3495(03)75016-4

S1.

Partial charges of Bacteriopheophytin, calculated by a semi-empirical method. Atom numbers are according to the PDB file IAIG

Atom name Charge Atom name Charge Atom name Charge Atom name Charge
NA −0.49 1HAA 0.02 C5 0.00 C3C −0.22
NB −0.5 2HAA 0.02 H8 0.00 CAC −0.11
HNB 0.36 C3A −0.22 H9 0.00 2HAC 0.07
NC −0.35 H3A 0.07 C6 0.00 CBC 0.08
ND 0.52 CMA 0.00 H10 0.00 2HBC 0.00
HND −0.01 1HMA 0.01 H11 0.00 3HBC 0.00
C1A −0.02 2HMA 0.01 C2B −0.04 1HBC 0.00
CHA 0.11 3HMA 0.01 CMB −0.02 C2D 0.05
C4D −0.15 CBA −0.3 1HMB 0.03 CMD 0.05
C1B 0.44 2HBA 0.1 2HMB 0.03 1HMD 0.01
CHB −0.65 1HBA 0.1 3HMB 0.03 2HMD 0.01
HHB 0.21 CGA 0.79 C3B −0.39 3HMD 0.01
C4A 0.56 O1A −0.54 CAB 0.79 C3D −0.43
C1C 0.28 O2A −0.43 OBB −0.52 CAD 0.89
CHC −0.46 C1 0.19 CBB −0.41 OBD −0.55
HHC 0.17 H1 0.01 HB1 0.11 CBD −0.8
C4B 0.4 H2 0.01 HB2 0.11 1HBD 0.3
C1D −0.25 C2 0.00 HB3 0.11 CGD 0.98
CHD −0.2 H3 0.00 C2C 0.17 OID −0.53
HHD 0.2 C3 0.00 H2C 0.02 O2D −0.49
C4C 0.17 C4 0.00 CMC −0.09 CED 0.27
C2A 0.14 H5 0.00 1HMC 0.03 1HED −0.02
H2A 0.06 H6 0.00 2HMC 0.03 2HED −0.02
CAA 0.06 H7 0.00 3HMC 0.03 3HED −0.02
NA 0.11 CAA −0.13 H7 0.00 2HAC 0.08
NB 0.12 1HAA 0.09 C5 0.00 CBC 0.11
NC 0.01 2HAA 0.09 H8 0.00 2HBC 0.00
ND 0.01 C3A −0.04 H9 0.00 3HBC 0.00
C1A 0.03 H3A 0.06 C2B −0.16 1HBC 0.00
CHA −0.22 CMA 0.01 CMB 0.11 C2D 0.18
C4D 0.21 1HMA 0.01 1HMB −0.01 CMD −0.03
C1B −0.05 2HMA 0.01 2HMB −0.01 1HMD 0.03
CHB −0.2 3HMA 0.01 3HMB −0.01 2HMD 0.03
HHB 0.19 CBA −0.21 C3B −0.32 3HMD 0.03
C4A −0.1 2HBA 0.08 CAB 0.65 C3D −0.41
C1C −0.19 1HBA 0.08 OBB −0.57 CAD 0.81
CHC −0.17 CGA 0.77 CBB −0.14 OBD −0.52
HHC 0.2 O1A −0.53 HB1 0.04 CBD −0.73
C4B −0.02 O2A −0.42 HB2 0.04 1HBD 0.29
C1D −0.06 C1 0.15 HB3 0.04 CGD 1.04
CHD −0.13 H1 0.01 C2C 0.24 O1D −0.57
HHD 0.18 H2 0.01 H2C −0.01 O2D −0.5
C4C 0.05 C2 0.00 CMC −0.05 CED 0.19
C2A 0.1 H3 0.0 1HMC 0.02 1HED 0.00
H2A 0.05 C3 0.0 2HMC 0.02 2HED 0.00
CAA −0.13 C4 0.0 3HMC 0.02 3HED 0.00
1HAA 0.09 H5 0.0 C3C −0.12 MG 0.0
2HAA 0.09 H6 0.0 CAC −0.18