| ABC | ATP-binding cassette |
| AmB | amphotericin B |
| CASP | Caspofungin |
| ChEBI | Chemical Entities of Biological Interest |
| CTR | Copper Transporter |
| DCT | Drug Conjugate Transporter |
| DE | differentially expressed |
| DHA | Drug:H+ Antiporter |
| FDR | False discovery rate |
| FLZ | fluconazole |
| GEO | Gene Expression Omnibus |
| GLM | Generalized Linear Model |
| HMT | Heavy Metal Transporter |
| ILT | Iron/Lead Transporter |
| MC | Mitochondrial Carrier |
| MDR | multidrug resistance |
| MFS | major facilitator superfamily |
| MIC | Minimum Inhibitory Concentration |
| MP | Maximum Parsimony |
| MPE | Mitochondrial Peptide Exporter |
| NBD | nucleotide-binding domain |
| NJ | Neighbor-Joining |
| NPC | nuclear pore complex |
| ORF | open reading frame |
| PDR | Pleiotropic Drug Resistance |
| ROS | reactive oxygen species |
| SIT | Siderophore–Iron Transporter |
| SP | Sugar Porter |
| STE | Sex Pheromone Exporter |
| TC | Transport Classification |
| TCDB | Transporter classification database |
| TMD | transmembrane domain |
| TMS | transmembrane segment |
| TPO | transporter of polyamines |
| ZIP | Zinc–Iron Permease |