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. 2003 Jul;85(1):61–69. doi: 10.1016/S0006-3495(03)74454-3

TABLE 1.

φ values calculated after Eq. 2 from the structures residing at the top of the free energy barrier at ρ = 0.3 (transition state barrier)

Residue pair φ Location Residue pair φ Location Residue pair φ Location
Thr-1–Val-3 0.10 β1-β2 Thr-14–Tyr-47 0 RT-distal Val-27–Ala-37 0.18 β2-β3
Phe-2–Ile-26 0.06 β1-β2 Asp-15–Pro-49 0 RT-helix Val-27–His-38 0.47 β2-β3
Phe-2–Trp-35 0.01 β1-β3 Leu-16–Phe-18 0.32 RT-RT Val-27–Thr-45 0.07 β2-distal
Phe-2–Val-53 0.34 β1-helix Leu-16–Leu-24 0 RT-β2 Asn-28–Leu-36 0.03 Nsrc-β3
Val-3–Ala-54 0.01 β1-β5 Leu-16–Ala-37 0 RT-β3 Asn-29–Asp-33 0 Nsrc-Nsrc
Ala-4–Phe-18 0.01 β1-RT Leu-16–Ser-39 0 RT-β3 Asn-29–Trp-35 0.17 Nsrc-β3
Ala-4–Glu-22 0.13 β1-div Leu-16–Ile-48 0 RT-β4 Trp-34–Tyr-47 0.54 β3-β4
Ala-4–Leu-24 0.15 β1-β2 Phe-18–Leu-24 0.02 RT-β2 Trp-35–Ile-48 0.14 β3-β4
Leu-5–Ala-54 0.03 β1-helix Phe-18–Ile-48 0 RT-β4 Trp-35–Ser-50 0.34 β3-helix
Tyr-6–Tyr-52 0.29 RT-helix Phe-18–Pro-49 0 RT-helix Leu-36–Thr-45 0.68 β3-β4
Asp-7–Lys-20 0.41 RT-div Phe-18–Trp-35 0 RT-β3 Leu-36–Tyr-47 0.24 β3-β4
Tyr-8–Ser-10 0.01 RT-RT Leu-24–Ala-37 1.08 β2-β3 Ala-37–Ser-39 0.58 β3-β3
Tyr-8–Pro-49 0 RT-helix Leu-24–Ser-39 0.98 β2-β3 Ala-37–Ile-48 0.40 β3-β4
Tyr-8–Tyr-52 0.13 RT-helix Leu-24–Ile-48 0.16 β2-β4 His-38–Leu-40 0.20 β3-distal
Ser-10–Asp-15 0.13 RT-RT Leu-24–Val-53 0.07 β2-β5 His-38–Thr-45 0.40 β3-β4
Ser-10–Ser-17 0.18 RT-RT Gln-25–Leu-40 0.68 β2-distal Ser-39–Thr-42 0.96 β3-distal
Thr-12–Thr-14 0 RT-RT Ile-26–Trp-35 0.55 β2-β3 Ile-48–Val-53 0.29 β4-β5
Thr-12–Asp-15 0.65 RT-RT Ile-26–Ala-37 0.68 β2-β3 Pro-49–Tyr-52 0.46 helix-helix
Glu-13–Gln-44 0 RT-distal Val-27–Leu-36 1.06 β2-β3 Ser-50–Val-53 0.33 helix-β5