TABLE 3.
B-factor correlation coefficients to x-ray structure
| Simulation system | ||||
|---|---|---|---|---|
| Domain | AS | BS | CS | DS |
| N-terminal domain | 0.41 | 0.60 | 0.37 | 0.52 |
| β9–81 | (0.18) | (0.41) | (0.20) | (0.35) |
| Nucleotide domain | 0.11 | 0.18 | 0.25 | 0.13 |
| β82–363 | (0.28) | (0.22) | (0.31) | (0.22) |
| C-terminal domain | 0.67 | 0.63 | 0.73 | 0.71 |
| β364–474 | (0.64) | (0.61) | (0.70) | (0.68) |
| Total system | 0.31 | 0.34 | 0.49 | 0.49 |
| β9–474 | (0.38) | (0.39) | (0.50) | (0.49) |
Correlation coefficients between (residue-averaged) B-factors from the crystal structure and calculated B-factors from the last 10 ns of the corresponding free dynamics simulations. Shown are the correlation coefficients to the open βE-subunit and (in parentheses) to the closed βTP-subunit.