Skip to main content
. 2003 Sep;85(3):2055–2068. doi: 10.1016/S0006-3495(03)74633-5

TABLE 2.

Electrostatic and hydrophobic interaction energies

PC Cyt c6
A. Hydrophobic and electrostatic interaction energies for wild-type (WT) cyt f interacting with PC and cyt c6 at 10 mM ionic strength (pH 7.0)*
 Hydrophobic surface area (Å2) 300 554
 Hydrophobic interaction energy (Kcal mol−1)
  A. assuming −25 (cal/Å2) −7.5 −13.8
  B. assuming −47 (calÅ2) −14.1 −26.0
 Electrostatic interaction energy (Kcal mol−1) −10.5 ± 1.5 −12.2 ± 3.5
Electrostatic interaction energies
Cyt f Ionic strength (mM) (kcal mol−1) % Inhibition
B. Electrostatic interaction energies for the interaction of cyt f with PC under different conditions
 WT 10 −10.5 ± 1.5
 WT 300 −2.5 ± 1.4 66
K189A 10 −6.1 ± 1.8 42
K189E 10 −1.9 ± 2.3 82
*

Hydrophobic interaction energies were calculated for the ten close complexes selected for Table 1. See Methods section for details of the calculations.

Ten close complexes were chosen at random from BD simulations of the interaction of wild-type and mutant cyt fs with PC under the conditions shown. Other conditions are as described in the Methods section.

Compared to wild-type (WT) cyt f complexes at 10 mM ionic strength.