Table 2.
Sequencing data statistics
| Sample | Raw_Reads | Raw_Bases | Valid_Reads | Valid_Bases | Valid% | Q20% | Q30% |
|---|---|---|---|---|---|---|---|
| Abn_tick1 | 51,980,070 | 7,797,010,500 | 49,583,942 | 7,437,591,300 | 95. 39% | 98. 24 | 94. 87 |
| Abn_tick2 | 50,107,902 | 7,516,185,300 | 47,699,646 | 7,154,946,900 | 95. 19% | 98. 24 | 94. 9 |
| Abn_tick3 | 46,679,824 | 7,001,973,600 | 44,523,174 | 6,678,476,100 | 95. 37% | 98. 34 | 95. 14 |
| N_tick1 | 43,471,968 | 6,520,795,200 | 41,436,784 | 6,215,517,600 | 95. 31% | 98. 06 | 94. 46 |
| N_tick2 | 45,841,872 | 6,876,280,800 | 43,555,210 | 6,533,281,500 | 95. 01% | 98. 05 | 94. 46 |
| N_tick3 | 45,865,180 | 6,879,777,000 | 43,789,538 | 6,568,430,700 | 95. 47% | 98. 17 | 94. 74 |