TABLE 2.
Main characteristics of ORFs identified within the 11-kb locus of Y. pseudotuberculosis strain 32777
| ORF | Size (aa) | Molecular mass (Da) | pI | Homolog as determined by BLAST | % Identity/homology (amino acid overlap) | GenBank accession no. |
|---|---|---|---|---|---|---|
| PilL | 356 | 38,710 | 8.9 | PilL encoded by S. enterica serovar Typhi (unknown function) | 43/53 (356) | AF000001 |
| PilM | 194 | 21,620 | 10.7 | Lipoprotein PilM encoded by S. enterica serovar Typhi (unknown function) | 42/57 (125) | AF000001 |
| PilN | 530 | 57,189 | 8.7 | Lipoprotein PilN encoded by plasmid R64 from S. enterica serovar Typhimurium (unknown function) | 45/59 (528) | D88588 |
| PilO | 445 | 49,158 | 9.0 | PilO encoded by S. enterica serovar Typhi (unknown function) | 33/50 (445) | AF000001 |
| PilP | 164 | 17,560 | 9.2 | PilP encoded by S. enterica serovar Typhi (unknown function) | 36/54 (149) | AF000001 |
| PilQ | 517 | 57,826 | 7.3 | Nucleotide-binding protein PilQ encoded by S. enterica serovar Typhi (unknown function) | 55/70 (495) | AF000001 |
| PilR | 369 | 41,411 | 8.6 | Integral membrane protein PilR encoded by plasmid R64 from S. enterica serovar Typhimurium (unknown function) | 44/59 (362) | D88588 |
| PilS | 195 | 20,191 | 9.7 | Prepilin PilS encoded by plasmid R64 from S. enterica serovar Typhimurium | 49/62 (189) | D88588 |
| PilU | 161 | 17,461 | 5.9 | Prepilin peptidase PilU encoded by S. enterica serovar Typhi | 30/46 (158) | AF000001 |
| PilV | 425 | 45,880 | 8.8 | Minor pilin PilV encoded by plasmid R64 from S. enterica serovar Typhimurium | 46/58 (423) | D88588 |
| PilW | 306 | 35,089 | 6.7 | Putative transposase Y1072 from Y. pestis plasmid pMT1 | 61/78 (306) | AF074611 |