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. 2004 Feb;86(2):690–704. doi: 10.1016/S0006-3495(04)74148-X

TABLE 2.

Comparison of pKa of residues belonging to the loop 3 cluster

Network-1
Network-2
Protein dielectric = 4
Protein dielectric = 20
Protein dielectric = 4
Protein dielectric = 20
Residues pKaintrinsic pKaapparent pKaintrinsic pKaapparent pKaintrinsic pKaapparent pKaintrinsic pKaapparent
Tyr-22 12.6 >14 10.6 >14 13.4 >14 10.8 >14
Asp-117 4.3 1.4 4.8 4.1 4.3 6.2 4.8 4.4
Glu-296 8.6 >14 5.1 8.4 8.0 >14 4.9 8.8
Tyr-310 >14 >14 11.4 >14 >14 >14 11.3 >14
Asp-312 2.9 7.5 3.7 2.4 1.4 <1 3.4 1.4