TABLE 5.
Average number of TRH molecules forming a specific H-bonding pattern with DPPC molecules during the simulations with TRH 1 m or 2 m at either 325 K or 475 K
| Pattern | 1 m, 325 K | 1 m, 475 K | 2 m, 325 K | 2 m, 475 K |
|---|---|---|---|---|
| 0 | 19.16 | 17.02 | 68.63 | 49.50 |
| 1 | 15.91 | 12.98 | 24.05 | 22.42 |
| 11 | 11.29 | 9.43 | 16.50 | 15.82 |
| 111 | 2.63 | 3.96 | 3.10 | 6.29 |
| 1111 | 0.30 | 1.11 | 0.58 | 1.32 |
| 11111 | 0.00 | 0.27 | 0.00 | 0.12 |
| 2 | 3.09 | 4.78 | 4.53 | 7.49 |
| 21 | 6.27 | 5.45 | 6.34 | 9.84 |
| 211 | 1.81 | 3.29 | 2.81 | 6.30 |
| 2111 | 0.46 | 1.24 | 0.56 | 2.09 |
| 22 | 0.59 | 0.43 | 0.27 | 0.75 |
| 221 | 0.42 | 0.45 | 0.15 | 0.88 |
| 3 | 0.50 | 0.65 | 0.17 | 1.12 |
| 31 | 0.61 | 0.67 | 0.21 | 1.25 |
| 311 | 0.62 | 0.53 | 0.05 | 0.92 |
| 32 | 0.01 | 0.04 | 0.01 | 0.08 |
| 4 | 0.01 | 0.07 | 0.00 | 0.18 |
| 41 | 0.03 | 0.05 | 0.00 | 0.16 |
| 5 | – | 0.00 | – | 0.01 |
| Others | 0.29 | 1.53 | 0.04 | 1.45 |
| Total | 64 | 64 | 128 | 128 |
A pattern is noted by series of integers (in descending order) indicating the number of H-bonds formed between a TRH molecule and a series of DPPC molecules. A zero indicates molecules forming no H-bonds to DPPC, whereas “Others” indicates TRH molecules forming more than five H-bonds. The averages are calculated over the interval 2.0–6.0 ns for each simulation.