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. 2004 Aug;87(2):800–811. doi: 10.1529/biophysj.104.040451

TABLE 7.

DNA entropy determined using Schlitter and Andricioaei-Karplus methods for the four DNA structures sampled here

SSchlitter SKarplus
L-WWWW 2.22 2.07
0.89 0.82
0.44 0.41
L-IIIII 2.23 2.07
0.88 0.81
0.43 0.40
H-WWWW 2.29 2.14
0.93 0.85
0.46 0.43
H-IIII 2.24 2.09
0.88 0.81
0.44 0.40

In all the cases, the extrapolation (t = ∞) technique developed by Harris et al. (2001) (see Methods) was used. All values are in kcal/mol K. SEs in the fitted values are always ∼0.1 kcal/mol K. Results for the entire DNA (top numbers within each group); results for the AATT track (middle numbers); and results for the central AT step (bottom numbers).