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. 2004 Sep;87(3):2043–2059. doi: 10.1529/biophysj.103.038497

TABLE 5.

The effect of mutants of Phormidium cytochrome f on their interaction with Phormidium PC in the absence of Zn2+

Class* Mutant Complexes formed per 1000 trajectories % WT 10−8 × k2 (M−1 s−1)
Q7E 23.3 ± 0.6 114 6.7 ± 0.7
WT 20.4 ± 0.5 100 5.9 ± 0.3
II Complex formation between 59 and 77% WT
E92A 14.7 ± 0.7 72 4.3 ± 0.4
E217A 13.0 ± 0.5 63 3.8 ± 0.3
D199A 12.6 ± 0.3 62 3.6 ± 0.3
Q7R 12.6 ± 0.2 62 3.7 ± 0.3
III Complex formation between 50 and 59% WT
E192A 11.6 ± 0.3 57 3.4 ± 0.4
D42A 11.6 ± 0.6 57 3.4 ± 0.3
D205A 11.4 ± 0.3 56 3.4 ± 0.4
D87A 11.0 ± 0.4 54 3.2 ± 0.4
E79A 11.0 ± 0.2 54 3.2 ± 0.3
D109A 10.6 ± 0.5 52 3.1 ± 0.3
E95A 10.6 ± 0.2 52 3.1 ± 0.3
E14A 10.5 ± 0.4 51 3.1 ± 0.4
IV Complex formation between 44 and 48% WT
D122A 9.8 ± 0.5 48 2.9 ± 0.3
E91A 9.6 ± 0.4 47 2.6 ± 0.3
E123A 9.5 ± 0.2 46 2.7 ± 0.3
D63A 9.1 ± 0.2 45 2.7 ± 0.2
E86A 9.0 ± 0.4 44 2.7 ± 0.3
V Complex formation <40% WT
D187A 7.2 ± 0.3 35 2.1 ± 0.3
E165A 6.8 ± 0.3 33 2.0 ± 0.3
D188A 6.5 ± 0.2 32 2.0 ± 0.3
*

Class II: the number of complexes was between 59 and 77% WT; class III: 50–59% WT; class IV: 44–48% WT; and class V: ≤35% WT. Note that the same class divisions were used for Tables 4 and 5 for ease of comparison.

The mutants were made as described in the Methods section. The number of complexes formed and the rates of electron transfer were calculated as described for Table 1 and in the Methods section.