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. 2004 Aug 31;87(5):3035–3049. doi: 10.1529/biophysj.104.049494

TABLE 1.

Calculated (Inline graphic(calc)) and experimental (Inline graphic(exp)) standard free energies of binding (kcal/mol) for cyclodextrin complexes (standard concentration 1 mol/liter), along with calculated results omitting mode scanning (Inline graphic(HA)), omitting both the harmonic approximation and mode scanning (Inline graphic(U + W)), and omitting the correction towards finite difference solutions of the linearized Poisson-Boltzmann equation (Inline graphic(GB))

Inline graphic(calc) Inline graphic(exp) Inline graphic(HA) Inline graphic(U + W) Inline graphic(GB)
Benzene
α-CD −1.96 −2.05 −2.77 −5.45 −0.87
β-CD −2.88 −2.77, −3.04 −3.47 −6.09 −2.36
γ-CD −1.47 −1.31 −1.22 −4.94 −0.78
Resorcinol
α-CD −1.80 −1.65 −2.67 −7.18 0.08
β-CD −3.11 −2.77* −3.21 −10.45 −1.80
γ-CD −1.92 −1.84 −2.47 −5.78 −0.23
Flurbiprofen
α-CD −2.36 −2.51 −4.48 −10.16 −0.45
β-CD −5.41 −4.97, −4.49 −6.26 −14.17 −2.77
γ-CD −5.47 −4.75 −5.79 −13.46 −1.85
Nabumetone
α-CD −2.09 −2.13 −2.27 −6.31 −1.09
β-CD −5.24 −4.59 −4.14 −10.72 −4.18
γ-CD −4.73 n/a −3.03 −12.27 −3.13
Naproxen
α-CD −2.77 n/a −3.79 −7.71 −1.41
β-CD −4.52 −4.32§ −5.42 −14.34 −2.16
γ-CD −4.27 n/a −4.26 −9.09 −1.79

Except as otherwise noted, T = 298 K and solutions are not buffered. n/a, no experimental data available.

*

T = 303 K.

pH = 7.

T = 293 K.

§

T = 295 K.

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