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. 2004 Sep 17;87(6):3982–3994. doi: 10.1529/biophysj.104.048454

TABLE 2.

Buried water molecules in staphylococcal nuclease variants

Label Occurrence* AW〉 (Å2) Brel NHB§ H-bond partners
Wat1 C1–C6 0.0 0.7 2.8 D77.N; L89.O
Wat2 C1–C6 0.0 0.8 3.0 V104.O; A109.O; W140.Nɛ1
Wat3 C1–C6 0.0 1.0 3.5 G20.N; P42.O; G55.O
Wat4 C5 0.0 0.8 3.0 G20.O; T22.O; E66.Oɛ2
Wat5 C5, C6 0.0 0.9 4.0 D19.O; E66.Oɛ1; Wat9
Wat6 C1–C6 1.0 0.9 3.3 Y115.N; N118.O; Wat10
Wat7 C1–C6 1.0 0.8 3.0 E73.Oɛ1; G96.N
Wat8 C1–C6 2.6 0.9 3.5 H8.O; E10.Oɛ2; F76.N
Wat9** C1, C2, C4–C6 2.5 (3.5) 1.2 (0.9) 2.4 (2.5) S59.O; (Wat5)
Wat10 C1–C6 ∼10 0.9 2.5 Y113.O; Wat6
*

Refers to the crystal structures in Table 1.

Solvent-accessible area of buried water molecule, averaged over the six crystal structures in Table 1.

B-factor of buried water molecule, divided by median B-factor for protein atoms (Table 1) and averaged over the six crystal structures.

§

Number of O or N atoms within 3.2 Å and belonging to protein or other buried water molecules, averaged over the six crystal structures.

Consensus hydrogen-bond partners (<3.2 Å), present in all six crystal structures.

**

Entries within parentheses refer to crystal structures C5 and C6 only.