TABLE 1.
Packaged volume fractions of some bacteriophage and eukaryotic viruses
Virus type | Host type | Genome length (Kbp) | Diameter (nm) | ρpack |
---|---|---|---|---|
Bacteriophage T7 | Bacteria | 40 | 55 | 0.490 |
Bacteriophage φ29* | Bacteria | 19.4 | 47 | 0.459 |
Bacteriophage T4 | Bacteria | 169 | 92 | 0.443 |
Bacteriophage λ† | Bacteria | 48.5 | 63 | 0.419 |
Bacteriophage P22 | Bacteria | 41.7 | 63 | 0.319 |
Herpes Virus HSV1 | Human | 152 | 125 | 0.159 |
Human Adenovirus C | Human | 36 | 80 | 0.143 |
Smallpox Virus 1‡ | Human | 186 | 220 | 0.036 |
Polyoma Virus SV40 | Human | 5.3 | ∼50 | 0.083 |
Mimivirus§ | Amoeba | ∼800 | ∼400 | 0.026 |
Papillomavirus BPV1 | Animal | 7.9 | 60 | 0.070 |
We have used the outer dimensions of the capsid from Baker et al. (1999) in the calculation of ρpack since these are more readily available than the dimensions of the empty space inside the capsid. The genome lengths are given, for most viruses, in National Center for Biotechnology Information (2004). The DNA in bacteriophage is seen to be significantly more tightly packed than the other viruses, revealing the geometric origin of the large packing forces associated with bacteriophage.
Tao et al. (1998). Since the φ29 capsids are aspherical, we use an average diameter that gives the correct volume.
World Health Organization (2004). Since the smallpox particles are aspherical, we use an average diameter that gives the correct volume.
La Scola et al. (2003); this is the largest virus currently known.