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. 2004 Nov 19;88(3):1507–1523. doi: 10.1529/biophysj.104.043976

TABLE 1.

Model parameter values; further details of the selection of the parameter values can be found in the text

Symbol Definition Value Notes
Receptor regulation
kr Receptor recycling rate 0.0023 s−1 Fit to experiment
ke Receptor endocytosis rate 0.023 s−1 Fit to experiment
[RT] = 2 × 104, K1 = 5 μM, K2 = 100 μM, and kp = 0.03 s−1 See Lemon et al. (2003a)
G-protein cascade
kdeg IP3 degradation rate 0.01 s−1 Fit to experiment
δ G-protein intrinsic activity parameter 0.0040 Fit to experiment
α Effective signal gain parameter 1.1 × 10−7 s−1 Fit to experiment
ν Cell volume 4.2 × 10−15 m3 From Fig. 4 A(d)
[GT] = 1 × 105, ka = 0.017 s−1, kd = 0.15 s−1,
[(PIP2)T] = 5 × 107, and Na = 6.02252 × 1023 See Lemon et al. (2003a)
ɛ31 Ratio of central SR to cytosolic volume 0.05 Aortal SM; Devine et al. (1972)
ɛ21 Ratio of peripheral SR to cytosolic volume 0.005 See text
βcsr, βpsr Calcium buffering constants 0.01 See text
[Bx] Conc. of cytosolic exogenous buffer (fluo3-AM) 10 μM Experimental value
Kx Fluo3-AM dissociation constant 1.1 μM Harkins et al. (1993)
ηIP3 Permeability of IP3 channels on central SR 1.2 × 104 s−1 Fit to experiment
ηRyR Permeability of RyRs on peripheral SR 7.2 s−1, Fit to experiment
ηlc Permeability of Ca2+ leak of central SR 40 s−1 Fit to experiment
ηpc Permeability of Ca2+ pumps on central SR 2300 μM s−1 Fit to experiment
ηlp Permeability of Ca2+ leak of peripheral SR 40 s−1 Fit to experiment
ηpp Permeability of Ca2+ pumps on peripheral SR 230 μM s−1 Fit to experiment
kbst Rate of RyR channel activation 1.3 s−1 Fit to experiment
τper Time between bursts 24.5 s From Fig. 10 A
τon Time to start of bursts 9.3 s See text
[(Ca2+)cyt]thr Threshold for RyR channel activation 160 nM See text
wdom Domain Ca2+ weighting factor 3.1 × 10−3 Fit to experiment
[(Ca2+)T] Total concentration of Ca2+ 533 μM Fit to experiment
d1 = 0.13 μM, d2 = 1.05 μM, d3 = 0.943 μM, d5 = 0.0823 μM,
[Be] = 150 μM, Ke = 10 μM, and k3 = 0.4 μM See Lemon et al. (2003a)
Plasmalemmal ion currents
ηBK Permeability of BK channels on the plasma membrane 40 pA Fit to experiment.
kbk Value of [(Ca2+)d] producing half-maximal activation of BK channels 2.8 μM Canine colonic myocytes; Carl et al. (1996)
mbk Hill coefficient of BK channels 3.2 Canine colonic myocytes; Carl et al. (1996)
Is Membrane outward current offset 6.0 pA From Fig. 9
Basal levels
[(Ca2+)cyt]bas = 121 nM; [(Ca2+)psr]bas = 97 μM; [(Ca2+)csr]bas = 96 μM; [G]bas = 45; and [IP3]bas = 10 nM See text