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. 2005 Feb 24;88(5):3536–3544. doi: 10.1529/biophysj.104.054809

TABLE 1.

Properties of the mutation sites

Position Structural context Fractional surface accessibility* Number of H-bonds Histidines and charged amino acids within a radius of 10 Å within the selected positions
H10 Turn 1.05 1 His3, His4, His15, His17
⊕ Lys9, Lys18
⊖ Glu14 and Asp19
T37 Turn 0.74 1 His36
⊕ Lys39, Lys252, Lys257, and Arg254
⊖ Asp32, Asp34, Asp110
S43 Turn 0.77 1 ⊕ Lys39, Lys45, Lys257, Lys261
⊖ Asp41, Asp85
V135 Turn 0.19 1 ⊕ Lys127, Lys133, and Arg27
⊖ Asp139 and Glu205
S152 Random coil 0.94 0 ⊕ Lys149, Lys154
⊖ Glu221
T177 End of β-sheet 1.35 1 ⊕ Lys159 and Arg58
⊖ Asp71, Asp175, Asp180, and Glu69
L240 Loop 0.58 1 ⊕ Lys168, Lys170, Lys225, Lys228, and Arg227
⊖ Glu236, Glu238, Glu239, and Asp243
*

Fractional accessibility was determined for the wild-type amino acid as the ratio of the absolute area of each amino acid divided by the area of the same, exposed amino acid situated in a tripeptide, Ala-Xaa-Ala (Lee and Richards, 1971).

In addition to these charged amino acids there are charged amino acids in the region between positions 10 and 37 (Lys24, Glu26, Arg27, and Arg254).