TABLE 5.
RNase Asp-14 group contributions to the PB static free energy
| Group* | ASPH | ASP |
|---|---|---|
| His-48 | 18.1(4.1) | 29.7(5.7) |
| Arg-33 | 9.0(2.4) | 21.9(4.8) |
| Tyr-25 | 3.6(3.7) | 9.6(3.5) |
| His-12 | 1.2(0.5) | 2.0(0.5) |
| Ser-16 | 1.0(0.9) | 1.8(1.1) |
| Glu-49 | −1.5(0.3) | −2.2(0.3) |
| Thr-82 | −1.9(0.4) | −2.0(0.5) |
| Ala-19 | −2.3(0.7) | −2.2(1.5) |
| Asp-14a† | 1.2(1.2) | 80.7(10.9) |
| Asp-14b‡ | −2.5(1.1) | −2.9(0.9) |
| Total | 6.4 | 131.0 |
Free energies in kcal/mol. The signs correspond to the ASP → ASPH direction (protonation). Standard deviation along the MD trajectories in parentheses.
Contribution due to the reaction field induced by the source charges at the insertion sites.
Contribution from Asp-14, excluding the source charges.