Fig. 2.

Breseq evidence of a JC event between IS1182_104 and the intergenic region between a putative signaling protein and an oxygen sensor protein. Rows corresponding to IS1182 are highlighted in orange. In figure labels: “Position” refers to the genomic position of the interested sequence, the first “reads (cov)” show the amount of reads and the relative coverage of the sequenced region, the second “reads (cov)” report the number of reads and the coverage supporting the mutation, and “freq” denotes the percentage of reads containing the variant.