TABLE 4.
Intraspecies variations of groES, spacer region, and groEL (partial) sequences of clinical isolates compared with those of ATCC reference strains
| Strain |
groES
|
Spacer region
|
Partial groEL (590 bp)
|
|||
|---|---|---|---|---|---|---|
| No. of nucleotide base differences | % Identity | No. of nucleotide base differences | Total no. of nucleotides | No. of nucleotide base differences | % Identity | |
| S. anginosus | ||||||
| 4093 | 15 | 94.7 | 0 | 31 | 30 | 93.6 |
| 1103 | 15 | 94.7 | 0 | 31 | 30 | 93.6 |
| 8752 | 2 | 99.3 | 0 | 31 | 13 | 97.3 |
| S. constellatus | ||||||
| 4277 | 2 | 99.3 | 7 | 39 | 4 | 99.2 |
| 8209 | 2 | 99.3 | 0 | 32 | 2 | 99.6 |
| 3886 | 0 | 100 | 0 | 32 | 9 | 98.1 |
| S. intermedius | ||||||
| 9626 | 2 | 99.3 | 1 | 32 | 29 | 93.9 |
| 6355 | 1 | 99.6 | 1 | 32 | 24 | 94.9 |
| 9712 | 1 | 99.6 | 0 | 32 | 13 | 97.3 |
| S. gordonii | ||||||
| 2593 | 7 | 97.5 | 0 | 22 | 20 | 95.8 |
| CAP-1 | 7 | 97.5 | 0 | 22 | 20 | 95.8 |
| 6916 | 10 | 96.5 | 0 | 22 | 26 | 94.5 |
| S. mitis | ||||||
| 1156 | 12 | 95.8 | 0 | 15 | 30 | 93.8 |
| 5664 | 24 | 91.6 | 0 | 15 | 27 | 94.4 |
| 7593 | 45 | 84.2 | 2 | 15 | 56 | 88.3 |
| S. oralis | ||||||
| 6387 | 12 | 95.8 | 0 | 15 | 36 | 92.4 |
| 7874 | 19 | 93.3 | 0 | 15 | 26 | 94.5 |
| 9925 | 12 | 95.8 | 0 | 15 | 36 | 92.4 |
| S. sanguis | ||||||
| 9638 | 8 | 97.2 | 0 | 23 | 23 | 95.1 |
| 1720 | 9 | 96.8 | 0 | 23 | 26 | 94.5 |
| 9682 | 11 | 96.1 | 0 | 23 | 23 | 95.1 |
| S. bovis | ||||||
| 1590 (biotype I) | 3 | 98.9 | 0 | 67 | 3 | 99.4 |
| 6528 (biotype I) | 1 | 99.6 | 0 | 67 | 3 | 99.4 |
| 6851 (biotype II/2) | 4 | 98.6 | 4 | 69 | 5 | 98.9 |
| 6655 (biotype II/2) | 4 | 98.6 | 4 | 69 | 7 | 98.5 |
| 5750 (biotype II/2) | 7 | 97.5 | 4 | 69 | 7 | 98.5 |
| S. mutans | ||||||
| 4152 | 2 | 99.3 | 0 | 111 | 3 | 99.4 |
| 5526 | 2 | 99.3 | 0 | 111 | 4 | 99.2 |
| 1037 | 3 | 99.3 | 0 | 111 | 4 | 99.2 |
| S. salivarius | ||||||
| 5246 | 17 | 94.1 | 4 | 44 | 23 | 95.1 |
| 419 | 6 | 97.9 | 1 | 44 | 3 | 99.4 |
| 4408 | 5 | 98.3 | 0 | 44 | 6 | 98.7 |