Table 1.
Protein families and pdb codes employed for simulations.
| protein family (size) | pdb code |
|---|---|
| acetylcholinesterase (5) | 1EVE, 1H22, 1J07, 1Q84, 1ZGC |
| cyclooxygenase (6) | 1EQG, 1EQH, 1HT5, 1HT8, 1Q4G, 4COX |
| EGFR (5) | 2ITP, 2ITT, 2ITY, 2RGP, 3BEL |
| HIV PR (12) | 1AJV, 1DMP, 1HVR, 1MER, 1MES, 1MET, 1QBS, 2F80, 2F81, 2IDW, 2IEN, 2IEO |
| HIV RT (10) | 1C1B, 1C1C, 1VRU, 2BE2, 2RKI, 2ZD1, 3BGR, 3DLE, 3DLG, 3DOL |
| IGF1R (4) | 2ZM3, 3NW5, 3NW6, 3NW7 |
| neuraminidase (10) | 1BJI, 1F8B, 1F8C, 1F8D, 1F8E, 1MWE, 1NNB, 1NNC, 1XOE, 1XOG |
| streptavidin (5) | 1DF8, 1SRG, 1SRI, 1SRJ, 2IZL |
| Total N = 57 systems |