Table 3.

Perlegen single-locus F_ST values for each population and over all populations

Chromosome	EA	HC	AA	AII
1	.08 (.32,.03)	.13 (.35,.04)	.09 (.34,.03)	.10 (.11,.02)
2	.09 (.32,.03)	.13 (.35,.05)	.10 (.34,.03)	.11 (.11,.02)
3	.08 (.32,.03)	.13 (.34,.04)	.08 (.33,.03)	.10 (.11,.02)
4	.09 (.32,.04)	.12 (.34,.04)	.08 (.33,.03)	.10 (.11,.02)
5	.08 (.32,.03)	.12 (.34,.04)	.10 (.34,.03)	.10 (.11,.02)
6	.08 (.31,.03)	.12 (.34,.04)	.10 (.34,.02)	.10 (.11,.02)
7	.08 (.32,.03)	.12 (.34,.03)	.10 (.34,.03)	.10 (.11,.02)
8	.09 (.32,.03)	.12 (.34,.05)	.12 (.35,.03)	.11 (.12,.02)
9	.08 (.32,.03)	.12 (.34,.04)	.09 (.33,.02)	.10 (.10,.02)
10	.10 (.33,.03)	.12 (.35,.04)	.11 (.34,.03)	.11 (.11,.02)
11	.08 (.31,.03)	.12 (.34,.04)	.09 (.33,.02)	.10 (.10,.02)
12	.08 (.33,.03)	.13 (.36,.04)	.10 (.34,.02)	.10 (.11,.02)
13	.09 (.32,.03)	.11 (.34,.04)	.11 (.34,.03)	.10 (.11,.02)
14	.09 (.33,.03)	.11 (.34,.03)	.10 (.34,.02)	.10 (.11,.01)
15	.10 (.33,.04)	.12 (.34,.03)	.09 (.33,.03)	.10 (.11,.02)
16	.08 (.31,.03)	.12 (.34,.03)	.10 (.34,.03)	.10 (.11,.01)
17	.08 (.31,.02)	.14 (.35,.04)	.10 (.34,.02)	.11 (.11,.02)
18	.09 (.32,.02)	.11 (.34,.03)	.08 (.33,.03)	.09 (.10,.01)
19	.09 (.32,.03)	.11 (.33,.02)	.09 (.33,.02)	.10 (.10,.02)
20	.10 (.31,.02)	.12 (.34,.05)	.08 (.31,.02)	.10 (.11,.02)
21	.09 (.32,.03)	.10 (.34,.03)	.09 (.33,.01)	.09 (.10,.01)
22	.08 (.31,.02)	.13 (.35,.03)	.09 (.33,.02)	.10 (.11,.01)
All	.08 (.32,.03)	.12 (.34,.04)	.10 (.34,.03)	.10 (.11,.02)

F_ST values are averaged over each chromosome. Shown in parentheses are standard deviations over each chromosome for single-SNP values and for 5-Mb window values.

(EA) European American, (HC) Han Chinese, (AA) African American.