ACSA2	Astrocyte Cell Surface Antigen-2
Adcy1	Adenylate Cyclase 1
Agt	Angiotensinogen, Serine Proteinase Inhibitor A8
Aif1	Allograft Inflammatory Factor 1 = IBA1
Ald1l1	Aldehyde Dehydrogenase 1 Family Member L1
ALS13	Amyotrophic Lateral Sclerosis type 13
AMPA	Alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid
Apoe	Apolipoprotein E
Atp1a3	ATPase Na+/K+ Transporting Subunit Alpha 3
Atx2	Ataxin-2 in flies
Atxn2	Ataxin-2
Atxn2l	Ataxin-2-like
Axl	AXL Receptor Tyrosine Kinase
Camk2a	Calcium/Calmodulin-Dependent Protein Kinase II Alpha
Camk2b	Calcium/Calmodulin-Dependent Protein Kinase II Beat
Cd32	Cluster of Differentiation 32
Cd63	Cluster of Differentiation 63
Cd68	Cluster of Differentiation 68
cDNA	Complementary DNA
Celsr3	Cadherin EGF LAG Seven-Pass G-Type Receptor 3
CH	Calponin-Homology
CID3/4	Chemical-Inducible Dimerization
Cldn5	Claudin 5
Clec7a	C-type lectin Domain-Containing Protein 7A
Cplx1	Complexin 1/2
Cst7	Cystatin-F
Cyfip2	Cytoplasmic FMR1 Interacting Protein 2
Ddx6	DEAD-Box Helicase 6
Dnm1	Dynamin 1
Eaat4	Excitatory Amino Acid Transporter 4, Solute Carrier Family 1 Member 6
EDTA	Ethylenediaminetetraacetic Acid
Eef1a1/2	Eukaryotic translation elongation factor 1 alpha 1/2
Eftud2	Elongation Factor Tu GTP Binding Domain Containing 2
Eno2	Enolase 2
Etnppl	Ethanolamine-phosphate phospho-lyase
Fam20c	Family With Sequence Similarity 20, Member C
Fbxl16	F-box and leucine-rich repeat protein 16
FC	Fold Change
Fcrls	Fc Receptor-Like S
FDR	False Discovery Rate
FMRP	Fragile X Mental Retardation Protein
Gad1/2	Glutamate Decarboxylase 1
GDP	Guanosine diphosphate
Gfap	Glial Fibrillary Acidic Protein
Gls	Glutaminase
GO	Gene Ontology
GO-BP	Gene Ontology—Biological Process
GO-CC	Gene Ontology—Cellular Component
GO-MF	Gene Ontology—Molecular Function
Gpnmb	Glycoprotein Nmb
Grin1	Glutamate Receptor, Ionotropic, N-Methyl D-Aspartate 1
GSEA	Gene Set Enrichment Analysis
Hexb	Hexosaminidase Subunit Beta
Hmgcr	3-Hydroxy-3-Methylglutaryl-CoA Reductase
Hmgcs1	3-Hydroxy-3-Methylglutaryl-CoA Synthase 1
IBA1	Ionized calcium-binding adapter molecule 1, = AIF1
Ifitm3	Interferon-induced transmembrane protein 3
Itgax	Integrin Subunit Alpha X
Kcnj8	Potassium Inwardly Rectifying Channel Subfamily J Member 8
Kcnq2	Potassium Voltage-Gated Channel Subfamily Q Member 2
Kif5a	Neuronal Kinesin Heavy Chain
KIN	Knockin
Lgals3	Lectin, galactoside-binding, soluble factor 3
Lgals3bp	Galectin-3 binding protein
lincRNA	Long intergenic non-coding RNA
Lpl	Lipoprotein Lipase
LSmAD	LSm-Associated Domain
MACE	Massive Analysis of cDNA Ends
MACS	Magnetic-Activated Cell Sorting
Map1b	Microtubule-Associated Protein 1B
Map2	Microtubule-Associated Protein 2
mGLUR1	Glutamate Metabotropic Receptor 1
Mical2	Microtubule-Associated Monooxygenase, Calponin and LIM Domain-Containing 2
miRNA	MicroRNA
Mpeg1	Macrophage Expressed 1
Mt-tRNA	Mitochondrial transfer RNA
Ndrg4	N-myc downstream-regulated gene 4
Nefh	Neurofilament Heavy Chain
Nefl	Neurofilament Light Chain
Neurod2	Neuronal Differentiation 2
NGS	Next-Generation Sequencing
Nptx1	Neuronal Pentraxin 1
Nufip2	Nuclear FMR1-interacting protein 2
Olfml3	Olfactomedin-Like 3
Olig2	Oligodendrocyte Transcription Factor 2
P2ry12	Purinergic Receptor P2Y12
PABP	Poly(A)-binding protein
Pabpc1	polyA-binding protein, cytoplasmic, type 1
PAR-CLIP	Photoactivatable Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation
PCA	Principal component analysis
piRNA	Piwi-interacting RNA
Plca3	= Gpnmb, Glycoprotein Nonmetastatic Melanoma Protein B
Ppfia4	PPFI Scaffold Protein A4
Pvalb	Parvalbumin
Rab15	Ras-Related Protein Rab-15
Rbfox3	RNA Binding Fox-1 Homolog 3
Rian	RNA Imprinted and Accumulated in Nucleus
RNA	Ribonucleic Acid
Rnf213	Ring Finger Protein 213
Rnu1b2	RNA, U1 Small Nuclear 2
Rph3a	Rabphilin 3A
rRNA	Ribonucleic acid
RT-qPCR	Reverse Transcriptase Quantitative Real-Time Polymerase Chain Reaction
S100b	S100 Calcium Binding Protein B
Sall1	Spalt-Like Transcription Factor 1
SCA2	Spinocerebellar Ataxia type 2
SCA5	Spinocerebellar Ataxia Type 5
SCAR14	Spectrin Beta, Non-Erythrocytic 2
scaRNA	Small Cajal body-specific RNA
Scn4b	Sodium voltage-gated channel beta subunit 4
SEM	Standard error of the mean
Slc11a1	Solute carrier family 11, member 1
Slc12a5	Solute Carrier Family 12 Member 5
Slc17a7	Vesicular glutamate transporter 1
SMN1	Survival Of Motor Neuron 1, Telomeric
Snap25	Synaptosome-associated Protein 25
snoRNA	Small Nucleolar RNA
snRNA	Small nuclear RNA
snRNP	Small nuclear ribonucleoprotein
SPARCA1	Spectrin-Associated Autosomal Recessive Cerebellar Ataxia
Spi1	Spi-1 Proto-Oncogene
Spp1	Secreted Phosphoprotein 1
Spock2	secreted protein acidic and rich in cysteine
Sptbn1	Spectrin Beta, Non-Erythrocytic 1
Sptbn2	Spectrin Beta, Non-Erythrocytic 2
sRNA	Small RNA
STRING	Search Tool for Recurring Instances of Neighboring Genes
Syne1	Spectrin Repeat Containing Nuclear Envelope Protein 1
Syt1	Syntaxin 1
Tmem119	Transmembrane Protein 119
Trank1	Tetratricopeptide Repeat And Ankyrin Repeat Containing 1
Trem2	Triggering Receptor Expressed On Myeloid Cells 2
tRNA	Transfer RNA
Tyrobp	TYRO Protein Tyrosine Kinase-Binding Protein
Unc13a	Unc-13 Homolog A
Usp18	Ubiquitin-Specific Peptidase 18
Vim	Vimentin
WT	Wild-type
ZFE	Central Animal Facility