INDEL	Insertion/deletion
ITS	Internal transcribed spacer
IZSUM	Istituto Zooprofilattico Sperimentale dell’Umbria e delle Marche “Togo Rosati”
MIC	Minimal inhibitory concentration
MSM	Men who have sex with men
NGS	Next-generation sequencing
PCR	Polymerase chain reaction
SNP	Single nucleotide polymorphism
SNV	Single nucleotide variant
SQLE	Squalene epoxidase gene
STI	Sexually transmissible infections
VCF	Variant Call Format