Table 3.
Molecular identification of the eight bacterial isolates based on 16S rDNA, gyrB, rpoB and rpoD regions sequencing.
| Strain | 16S rDNA (ID%) | gyrB (ID%) | rpoB (ID%) | rpoD (ID%) |
|---|---|---|---|---|
| 1N2 |
P. alliivorans (99.72%) |
P. viridiflava (93.48%) |
P.viridiflava (97.70%) | P. syringae pv. primulae (96.68%) |
| 1N3 |
P. alliivorans (99.74%) |
P. viridiflava (93.37%) |
P. viridiflava (97.55%) |
P. syringae pv. primulae (96.68%) |
| 1N4 |
P. alliivorans (99.73%) |
P. viridiflava (93.59%) |
P. viridiflava (98.02%) |
P. syringae pv. primulae (96.63%) |
| 2N5 |
P. asturiensis (100%) |
P. asturiensis (95.55%) |
P. syringae (97.06%) |
P. asturiensis (96.31%) |
| 2N9 |
P. asturiensis (99.72%) |
P. asturiensis (95.42%) |
P. syringae (97.06%) |
P. asturiensis (96.31%) |
| 2N8 |
P. viridiflava (100%) |
P. viridiflava (99.51%) |
P. viridiflava (98.99%) |
P. viridiflava (99.85%) |
| 3N1 |
P. viridiflava (100%) |
P. viridiflava (99.82%) |
P. viridiflava (99.24%) |
P. viridiflava (97.89%) |
| 3N3 |
P. viridiflava (99.66%) |
P. viridiflava (99.83%) |
P. viridiflava (99.04%) |
P. viridiflava (97.92%) |
The BLASTn tool (http://blast.ncbi.nlm.nih.gov/) was used to identify the most similar sequences in the NCBI nucleotide database, with the “sequences from type material” option enabled. In brackets, the percentage of identity (ID%).