TABLE 1.
Virus | Nonlimited lifespan
|
Rapid turnover
|
||||
---|---|---|---|---|---|---|
SIVMneCL8 | SIVMne170 | Fitnessa | SIVMneCL8 | SIVMne170 | Fitness | |
SIVMneCL8 | Win | High | Lose | Low | ||
SIVMne170 | Lose | Low | Win | High | ||
8/170xr-sub | Equal | Win | High | Equal | Lose | Low |
8/170 | Lose | Equal | Low | Equal | Lose | Low |
170/8 | Equal | Win | High | Win | Equal | High |
“High” and “low” fitness phenotypes were defined from the relative fitness of SIVMneCL8 and SIVMne170 (in bold). For chimeric viruses, the phenotype was determined from competitions with each of the parental variants. The outcome of the competition was labeled according to the relative fitness value of the chimera (w). For 0.1 < |w| < 0.1, the outcome was judged as a tie (labeled as equal); for w > 0.1, the outcome was judged as “lose” (chimera is less fit); for w > 0.1, the outcome was judged as “win” (chimera is more fit). The chimera's phenotype was assigned as “high” when the chimera had equal fitness with the high-fitness parental strain and won competition with the low-fitness parental strain (w > 0.1). The chimera's phenotype was assigned as “low” when the chimera had equal fitness with the low-fitness parental strain and lost the competition with the high-fitness parental strain.
8/170xr-su chimera contains a portion of the SIVMne170 sequence responsible for syncytium formation, including the vpx/vpr genes and the SU portion of the env gene, in the background of SIVMneCL8; 8/170 chimera contains the 5′ half of SIVMneCL8 and the 3′ half of SIVMne170; 170/8 chimera contains the 5′ half of SIVMne170 and the 3′ half of SIVMneCL8.