TABLE 2.
Medium | Value obtained with:
|
||||
---|---|---|---|---|---|
hly system (FAM)
|
IAC system (VIC)
|
||||
CTa | ΔRnb | Relative accuracyc | CTd | ΔRnb | |
Double-distilled water | 30.15 ± 0.15 | 0.95 ± 0.02 | 94.76 | 33.55 ± 0.61 | 0.55 ± 0.26 |
BPW | 30.05 ± 0.16 | 0.98 ± 0.03 | 100.50 | 33.95 ± 0.52 | 0.60 ± 0.19 |
BHI | 30.22 ± 0.12 | 0.96 ± 0.02 | 90.94 | 33.79 ± 0.49 | 0.65 ± 0.22 |
Half-Fraser | 36.55 ± 1.05 | 0.70 ± 0.05 | 2.20 | 38.20 ± 1.20 | 0.13 ± 0.04 |
Fraser | 37.25 ± 1.20 | 0.72 ± 0.05 | 1.45 | 38.52 ± 1.05 | 0.11 ± 0.04 |
Cycle number at which fluorescence intensity equals a fixed threshold. FAM CT values (mean plus or minus standard deviation) were calculated with a prefixed threshold at 0.035 and a baseline from cycles 3 to 15.
ΔRn is the difference between R+n (reporter emission intensity/passive reference emission intensity) and R−n (background reporter emission intensity/passive reference emission intensity [calculated in number of template controls]) (3).
Degree of correspondence between the response obtained by the reference method (2) and the response obtained by the alternative (Q-PCR) method.
VIC CT values were calculated with a prefixed threshold at 0.035 and a baseline from cycles 3 to 23.