TABLE 2.
Results from reverse line blot hybridization with 15 probes specific for freshwater bacterial groups
| Probea | Bacterial cluster targetedb | Phylogenetic affiliation | Similarity within cluster (%) | No. of positive lakes | Positive lakes in regionsc
|
|||
|---|---|---|---|---|---|---|---|---|
| Svalbard | Lappland | Jämtland | Uppland | |||||
| LD12-143 | LD12 cluster | Alphaproteobacteria | 99 | 11 | SA | All | ÅN | TG, SF, HÅ, VA |
| Rho-BAL47-396 | Rhodoferax sp. strain BAL 47 cluster | Betaproteobacteria | 95 | 15 | All | All | ÅN | All |
| Rpicketti-490 | Ralstonia pickettii cluster | Betaproteobacteria | 95 | 12 | All | All | ÅN | HÅ, ÄP |
| CR-FL23-464 | PnecA1 cluster | Betaproteobacteria | 98 | 8 | None | All | ÅN | TG, SF |
| LD28-451 | LD28 cluster | Betaproteobacteria | 97 | 12 | SA, TV | All | ÅN | TG, SF, HÅ, VA |
| GKS98-442 | GKS98 cluster | Betaproteobacteria | 98 | 12 | SA, TV, ØV | All | ÅN | TG, SF, HÅ |
| Mpsychro-211 | Methylobacter psychrophilus cluster | Gammaproteobacteria | 99 | 1 | None | None | None | HÅ |
| ACK-M1-193 | ACK-M1 cluster | Actinobacteria | 91 | 15 | All | All | ÅN | All |
| Sta230-187 | Sta2-30 cluster | Actinobacteria | 99 | 13 | SA, TV, ØV | All | ÅN | TG, SF, HÅ, VA |
| Urk014-126 | Urk-014 cluster | Actinobacteria | 98 | 2 | TV | None | None | TG |
| CL0-14-464 | CL0-14 cluster | Verrucomicrobia | 98 | 14 | SA, TV, ØV | All | ÅN | All |
| FukuN18-221 | FukuN18 cluster | Verrucomicrobia | 93 | 3 | None | UB | None | HÅ, VA |
| Syn/Pro-415 | Synechococcus cluster 6b | Cyanobacteria | 95 | 2 | None | None | ÅN | VA |
| Oagardhii-425 | Planktothrix agardhii cluster | Cyanobacteria | 99 | 0 | None | None | None | None |
| Aflosaquae-199 | A. flos-aquae cluster | Cyanobacteria | 96 | 0 | None | None | None | None |