TABLE 5.
Identity of VER47-positive isolates and their phylogenetic affiliations as determined by BLAST analysis in GenBank databases (1)a
| Isolate | 16S rRNA gene sequence
|
Medium (month of colony appearance) | Affiliation(s) | |
|---|---|---|---|---|
| Length (bp) | GenBank accession no. | |||
| Ellin501 | 1,348 | AY960764 | VL55 + amino acids (2) | Verrucomicrobia, “Spartobacteria” |
| Ellin502 | 1,371 | AY960765 | VL55 + xylan (2) | Verrucomicrobia, “Spartobacteria” |
| Ellin503 | 1,327 | AY960766 | VL55 + amino acids (2) | Verrucomicrobia, “Spartobacteria” |
| Ellin504 | 1,473 | AY960767 | VL55 + amino acids (3) | Rubrobacteridae |
| Ellin505 | 1,438 | AY960768 | VL55 + xylan (3) | Bacillus |
| Ellin506 | 1,468 | AY960769 | DNB (3) | Verrucomicrobia, “Spartobacteria” |
| Ellin507 | 1,448 | AY960770 | DNB (3) | Verrucomicrobia, “Spartobacteria” |
| Ellin508 | 1,480 | AY960771 | VL55 + xylan (3) | Verrucomicrobia, “Spartobacteria” |
| Ellin509 | 1,480 | AY960772 | VL55 + xylan (3) | Verrucomicrobia, “Spartobacteria” |
| Ellin510 | 1,424 | AY960773 | VL55 + xylan (3) | “Deinococcus-Thermus” |
| Ellin511 | 1,362 | AY960774 | VL55 + xylan + 2% (vol/vol) supernatant (3) | Verrucomicrobia, “Spartobacteria” |
| Ellin512 | 1,428 | AY960775 | VL55 + xylan + cAMP (3) | “Deinococcus-Thermus” |
| Ellin513 | 1,361 | AY960776 | VL55 + xylan + 20% (vol/vol) supernatant (3) | Verrucomicrobia, “Spartobacteria” |
| Ellin514 | 1,443 | AY960777 | VL55 + xylan + CO2 (1) | Verrucomicrobia, subdivision 3 |
| Ellin515 | 1,481 | AY960778 | VL55 + xylan (1) | Verrucomicrobia, subdivision 3 |
| Ellin516 | 1,357 | AY960779 | VL55 + xylan (2) | Verrucomicrobia, subdivision 3 |
| Ellin517 | 1,429 | AY960780 | VL55 + xylan (>3) | Verrucomicrobia, subdivision 3 |
| Ellin518 | 1,479 | AY960781 | VL55 + xylan (>3) | Verrucomicrobia, subdivision 3 |
a
Details of the medium on which each was isolated and the month in which the colony that the isolate originated from first became visible are also given. cAMP, cyclic AMP.