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. 2026 May 18;17(5):581. doi: 10.3390/genes17050581
Step Criterion Quantitative Threshold Cancer Type
1 Expression filtering Remove snoRNAs with zero expression in all samples NSCLC, HNSC
2 Identification of immune-related snoRNAs (partial correlation) |r| > 0.2, nominal p < 0.05, empirical FDR < 0.25 NSCLC, HNSC
3 Identification of immune-related snoRNAs (GSEA) q < 0.25, adjusted p < 0.05 NSCLC, HNSC
4 Final immune-related snoRNA set Intersection of step 2 and step 3 NSCLC, HNSC
5 Correlation with immune infiltra-tion (TIMER) |Spearman r| ≥ 0.3, p < 0.05 for any immune cell types NSCLC, HNSC
6 Final subtyping snoRNA set Intersection of step 4 and step 5 NSCLC: 46 genes; HNSC: 39 genes