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. 2026 May 8;27(10):4201. doi: 10.3390/ijms27104201
IPF Idiopathic Pulmonary Fibrosis
scRNA-seq Single-Cell RNA Sequencing
DEGs1 Differentially Expressed Genes 1
WGCNA Weighted Gene Co-Expression Network Analysis
ROC Receiver Operating Characteristic
Th2 cells T Helper 2 Cells
ECM Excessive Extracellular Matrix
GSEA Gene Set Enrichment Analysis
GEO Gene Expression Omnibus
MARGs Mitophagy-Associated Genes
MSigDB Molecular Signature Database
HVGs Highly Variable Genes
PCA Principal Component Analysis
PCs Principal Components
UMAP Uniform Manifold Approximation and Projection
FC Foldchange
DEGs2 Differentially Expressed Genes2
GO Gene Ontology
KEGG Kyoto Encyclopedia of Genes and Genomes
MM Module Membership
GS Gene Significance
MARMGs Mitophagy-Related Module Genes
PPI Protein–Protein Interaction
STRING Search Tool for the Retrieval of Interacting Genes
LASSO Least Absolute Shrinkage and Selection Operator
AUC Area Under the Curve
NES Normalized Enrichment Score
FDR False Discovery Rate
DGIdb Drug–Gene Interaction Database
RT-qPCR Reverse Transcription Quantitative Polymerase Chain Reaction
IL-4 Interleukin-4