Table 2. Zero-shot transfer and fine-tuning performance on the experimental Chemical Education dataset. Top-k structure prediction accuracy (%) is reported for overlap and unseen molecular subsets under different spectral input configurations. External baseline results from prior work21 are shown for reference.
| Mode | Spectra input | Test set | Top-1 | Top-5 | Top-10 | Top-100 |
|---|---|---|---|---|---|---|
| Alberts21 zero-shot baseline | H | Full | 20.00 | 31.58 | — | — |
| C | Full | 48.42 | 66.32 | — | — | |
| Zero-shot | H | Overlap | 17.71 | 34.38 | 41.67 | 53.12 |
| Unseen | 21.54 | 30.77 | 36.92 | 45.38 | ||
| C | Overlap | 57.29 | 70.83 | 80.21 | 88.54 | |
| Unseen | 41.54 | 62.31 | 68.46 | 77.69 | ||
| C + H | Overlap | 32.29 | 53.12 | 59.38 | 67.71 | |
| Unseen | 33.08 | 45.38 | 49.23 | 55.38 | ||
| Fine-tune | H | Unseen | 55.38 | 76.15 | 80.77 | 90.00 |
| C | Unseen | 53.08 | 80.77 | 84.62 | 92.31 | |
| C + H | Unseen | 66.15 | 81.54 | 86.15 | 90.77 |