Table 2.
Clustering results
Annotation | # sequences | Species |
Myosins | 56 | A.t., C.e., D.m., H.s., M.m., O.s., S.c., S.p. |
SMCs | 13 | A.f., A.tu., B.b., B.s., C.v., H.s., M.g., M.j., M.m., M.t., S.c., S.sp., T.a. |
Laminins | 10 | D.m., H.s., M.m. |
ROCK | 9 | C.e., D.m., H.s., M.m. |
ELKS/ERC1 | 7 | H.s., M.m. |
SLAP | 5 | H.s., M.m. |
Kinectin | 5 | H.s., M.m. |
Periplakin | 5 | H.s., M.m. |
DOC1/FILIP | 5 | H.s. |
C-Nap | 5 | D.m., H.s., M.m. |
CASP/CDP | 4 | H.s., M.m. |
CENP-F | 4 | H.s., M.m. |
Lamins | 4 | H.s., M.m. |
Hypothetical | 4 | C.e. |
Unknown | 4 | A.t., O.s., S.p. |
Unknown | 4 | A.t., O.s. |
Largest clusters identified in a pilot analysis using all prokaryotic long coiled-coil proteins and eukaryotic proteins with coiled-coil domains longer than 250 amino acids or more than 60% coverage. Only clusters with four or more members are listed. ROCK, Rho-associated coiled-coil containing kinase [114]; ELKS/ERC1, Rab6-interacting protein [115], SLAP, sarcolemmal-associated protein [116]; DOC1, downregulated in ovarian cancer 1 [117]; CENP-F, centromer protein F [118]. For species name abbreviations, see Table 1.