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. 2005 Dec 15;102(52):19243–19248. doi: 10.1073/pnas.0509473102

Table 1. Primer sequences that were used for mapping, the type of sequence in which they are located, and the chromosomal location of the amplification products.

Primer Sequence Repeats Chromosomal origin
TA350B2_18F1 ACG ATG TTT ACC CAG GTT CG LTR retrotransposon Fatima 1B
TA350B2_18R1 CTT GTC CTT CCT TTC GCT TG CACTA element Jorge
TA350B2_18F2 TAC GAG AGA AAC GCA CAT CG CACTA element Jorge 1BL
TA350B2_18R2 ATC CCG GAA ACC GAA TTA TC LTR retrotransposon Fatima
TA574A4_10F1 CAT GGT GTC TAT CTA CCT CTC EST 3D
TA574A4_10R1 GGA CGA CAT CCT GAG GTT C EST
TA574A4_10F2 GGG TGG CAT TTC TGG ATC AG EST 3B or 3D
TA574A4_10R2 TTG AGC GCC TCC TGA TGA G EST
TA574A4_27F1 GGC AGA TCA CTG GAA GAA GC CACTA element Caspar 3DL
TA574A4_27R1 ACA GCA TCA GTC CGG GTT AG LTR retrotransposon Wham
TA1353M1_5F1 ATA AAT TTC CGC CGA TTC AG CACTA element Sherlock 3BL
TA1353M1_5R1 TGC GCC ATT AGT GTC AAT TC CATCA element TAT-1
TA1353M1_13F1 GCT GAT TGG AGC CTA CAA TC EST 3B
TA1353M1_13R1 TCT GGT AAC AGT GAG ATA AC EST
TA1426L2_16F2 TGA TCC AGT GAT AAC CCA CAA G Reverse transcriptase 5B
TA1426L2_16R2 GCC CCT GGT TCT TAT TTA CG LTR retrotransposon Egug
TA1426L2_17F1 ACA CCC AAA GCA TTC CTA CG LTR retrotransposon WIS 5BL
TA1426L2_17F2 TGC GAC GAT TGG ATT ACA AG CACTA element Caspar
TA1426L2_28F1 GAA AGA CCT CGG TGA AGC TG LTR retrotransposon Angela 5BL
TA1426L2_28F2 AAA CCG GAT GGC TCT AGT CC LTR retrotransposon Fatima