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. 2006 Jan 5;34(1):201–205. doi: 10.1093/nar/gkj419

Figure 1.

Figure 1

An example superword array for a combined sequence of two short reads. The combined sequence is given on the top row. For each base of the combined sequence, the position of the base is shown below the base on the second row and the code of the word of length 2 starting at the position is shown below the position on the third row. The ordered sequence positions in the superword array are shown on the fourth row. For each sequence position in the superword array, the code of the superword at word level 3 starting at the position is given as a column of three word codes on the bottom three rows.