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Three difference rates between the set of finished sequences and the set of contig consensus sequences for each of the assemblies produced by PCAP.REP and PCAP
| Program | Substitution rate | Deletion rate | Insertion rate |
|---|---|---|---|
| PCAP.REP | 0.001376 | 0.000089 | 0.000040 |
| PCAP | 0.002194 | 0.000164 | 0.000136 |
