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. 2006 Jan 10;34(1):e6. doi: 10.1093/nar/gnj002

Table 2.

BIOREL evaluation of PPI MS-PCI data

Experiment Network bias tested by BIOREL BIOREL modules Bias scorea
Gavin Ho
1 Interacting proteins share the same function FunCat module 0.64 0.29
2 Interacting proteins share sequence similarity (or partial similarity) Sequence Similarity and InterPro Domain modules 0.19 0.09
3 Interacting proteins have the same length Gene length module ∼0.04 ∼0.02

aThe bias score is a proportion of genes in the network with significantly (P < 0.01) biased associations.